Structural studies of aquporins in human kidney and plant
Abstract
Membrane proteins are key players in our biology and are links between the inside and the outside of the cell, allowing for signal transduction and transport of molecules. Aquaporins are membrane protein channels that allow water to pass in and out of the cell. Since all life depend on water, their function is vital for any type of organism. Although aquaporins are very similar, they have small but important differences in their structure and function. Understanding these subtle dissimilarities helps us understand the fundamentals of our biology and is also essential if aquaporins are to be used as drug targets.
This thesis has investigated the structure and function of two aquaporins from different species; human and spinach. The spinach aquaporin SoPIP2;1 has become the structural model for gated plant aquaporins. In this thesis, structural and functional data is presented that gives further insights into the gating mechanism controlled by the physiological signals phosphorylation, pH and divalent cations. In addition, the mechanism behind the activation of SoPIP2;1 by mercury, commonly regarded as an aquaporin blocker, has been studied.
Human Aquaporin 2 is crucial for the kidneys ability to concentrate primary urine, and its malfunction leads to nephrogenic diabetes insipidus. An X-ray crystallographic structure to 2.95Å is presented, which show that AQP2 is markedly different also from its most closely related homologues. These differences are mainly focused on loop D and the C-terminus and can be related to binding of Cd2+ in the structure. We present data that Cd2+ could correspond to Ca2+ in vivo, and discuss the role of the C-terminal helix as a protein interaction partner. In addition, mutations leading to nephrogenic diabetes insipidus are studied in the structural context.
Parts of work
Nyblom M, Frick A, Wang Y, Ekvall M, Hallgren K, Hedfalk K, Neutze R, Tajkhorshid E, Törnroth-Horsefield S. “Structural and functional analysis of SoPIP2;1 mutants add insights into plant aquaporin gating”. J.Mol. Biol. 387(3):653-668 (2009) ::PMID::19302796 Frick A, Järvå M, Törnroth-Horsefield S. “Structural basis for pH gating of plant aquaporins.” FEBSLett. 2013 Feb 26. ::PMID::23454640 Frick A, Järvå M, Ekvall M, Uzdavinys P, Nyblom M, Törnroth-Horsefield S. “Mercury activation of the plant aquaporin SoPIP2;1 - structural and functional characterization”. Manuscript Frick A, Kosinska-Eriksson U, Öberg F, Hedfalk K, Neutze R, de Grip W, Deen P, Törnroth-Horsefield S. “X-ray structure of human AQP2 at 2.95 Å resolution”. Manuscript
Degree
Doctor of Philosophy
University
University of Gothenburg. Faculty of Science
Institution
Department of Chemistry and Molecular Biology ; Institutionen för kemi och molekylärbiologi
Disputation
Fredagen den 12 april 2013, kl. 9.30, Sal Ragnar Sandberg, Medicinaregatan 7A
Date of defence
2013-04-12
anna.frick@chem.gu.se
Date
2013-03-22Author
Frick, Anna
Keywords
structural biochemistry
membrane protein
aquaporin
Publication type
Doctoral thesis
ISBN
978-91-628-8661-5
Language
eng