Reverse structural biology: Cellular processes uncovered by electron microscopy
Abstract
This thesis contains two projects, both using electron microscopy as the primary technique. In the first project, nuclear envelope budding (NEB) is investigated as an alternate method of transport across the nuclear envelope. We show that NEB is a conserved aspect of eukaryotic cells grown under normal conditions, and that it is upregulated during various types of cellular stress.
In the second part of the thesis, we investigate novel aspects of human flagellar structure using cryo-electron microscopy and tomography. We show that in the tip of human flagella, doublet microtubules can split into two complete singlet microtubules. These singlet MTs contain a helical structure called TAILS, which we hypothesize has a stabilizing effect on the microtubules. Using single particle analysis, we are attempting to identify the proteins that form TAILS by identifying protein domains in the structure. We also reconstructed doublet microtubules from near the tip region, and describe novel microtubule inner proteins, notably large bundles of filaments in the A-tubule.
Parts of work
Dimitra Panagaki* and Jacob T Croft*, Katharina Keuenhof, Lisa Larsson- Berglund, Stefanie Andersson, Markus J Tamás, Thomas Nyström, Richard Neutze, Johanna L Höög. *These authors contributed equally to the manuscript. Nuclear envelope budding is a response to cellular stress. Unpublished manuscript (2021). Jacob T Croft*, Davide Zabeo*, Radhika Subramanian, Johanna L Höög.
*These authors contributed equally to the manuscript. Composition, structure and function of the eukaryotic flagellum distal tip. Essays Biochem, 62 (6): 815–828 (2018). ::doi:: 10.1042/EBC20180032 Davide Zabeo, Jacob T Croft, Johanna L Höög. Axonemal doublet microtubules can split into two complete singlets in human sperm flagellum tips. FEBS Lett, 593: 892- 902 (2019). ::doi:: 10.1002/1873-3468.13379 Jacob T Croft*, Davide Zabeo*, Vajradhar Acharya, Václav Bočan, Mandy Rettel, Frank Stein, Christer Edvardsson, Lenka Libusová, Mikhail Savitski, Per O Widlund, Radhika Subramanian, Justin M Kollman, Johanna L Höög. *These authors contributed equally to the manuscript. Identification and biochemical characterization of TAILS: a microtubule inner complex. Unpublished manuscript (2021).
Degree
Doctor of Philosophy
University
University of Gothenburg. Faculty of Science
Institution
Department of Chemistry and Molecular Biology ; Institutionen för kemi och molekylärbiologi
Disputation
kl. 15:00 i hörsalen i Botanhuset, Carl Skottbergsgata 22B, Göteborg.
Date of defence
2021-04-16
jacob.croft@gu.se
Date
2021-03-25Author
Croft, Jacob T.
Keywords
flagella
nuclear envelope budding
TAILS
cryo-EM
microtubule inner protein
Publication type
Doctoral thesis
ISBN
978-91-8009-283-8
Language
eng