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Development of MALDI Mass Spectrometry Imaging Methods for Probing Spatial Lipid Biochemistry of Amyloid Plaques in Alzheimer's Disease

Abstract
Alzheimer’s disease (AD) is the most prevalent cause of neurodegenerative dementia. Aggregation of amyloid β (Aβ) peptides into extracellular Aβ plaques is one of the major neuropathological features of AD. However, Aloysius Alzheimer reported remarkable lipid granule accumulations in multiple glial cell types and intense lipid granules in the plaque core in AD brain along with the proteopathic features of AD in his initial reports. While the role of lipids in AD has until recently not received as much attention, a body of molecular, immune, genetical, biochemical evidence closely links aberrant lipid metabolism to several stages of AD pathogenesis. Therefore, plaque-associated lipid molecular information in specific brain regions would be a strong asset to dissect spatial lipid biochemistry of amyloid plaques which would also provide a basis for further investigation of cell signaling and metabolic pathways that are disrupted in AD. This thesis represents the development of matrix-assisted laser desorption/ionization (MALDI) mass spectrometry imaging (MSI) methods for single-plaque resolution spatial lipidomics across the brain tissue sections of transgenic AD mouse models. The developed methods include “static” MALDI for high-spatial-resolution (at 10 μm) lipid imaging using low-energy laser pulses which can be followed by immunofluorescence imaging of the same brain tissue section, dual polarity MALDI-MSI on the same pixel points for spatial correlation of lipid species ionized in both negative and positive polarities and “trimodal” MALDI-MSI which allows spatial correlation of lipid species in dual polarity with peptide/protein species within the same brain tissue sections at 10 μm spatial resolution. These MALDI-MSI methods in combination with immunohistochemistry revealed plaque-associated alterations of several phospholipids, lysophospholipids, and sphingolipids along with the Aβ peptide truncations and leveraged the understanding of molecular, structural and immune signatures of Aβ pathology. For instance, we observed amyloid plaque-associated myelin lipid architecture loss, apolipoprotein E (APOE) mediated sulfatide depletion, region-specific and long chain base specific accumulations of monosialogangliosides, and accumulations of several lysophospholipids in amyloid plaques in transgenic AD mouse brain. In summary, lipids are important components of amyloid plaques and above mentioned novel MALDI-MSI methods in combination with other modalities have great potential for probing spatial lipid molecular pathology of amyloid plaques which can provide novel insights into AD pathogenesis.
Parts of work
Kaya, I.; Michno, W.; Brinet, D.; Iacone, Y.; Zanni, G.; Blennow, K.; Zetterberg, H.; Hanrieder, J. Histology-Compatible MALDI Mass Spectrometry Based Imaging of Neuronal Lipids for Subsequent Immunofluorescent Staining. Analytical Chemistry 2017; 89: 4685 4694. ::PMID::28318232
 
Kaya, I.; Brinet, D.; Michno, W.; Başkurt, M.; Zetterberg, H.; Blennow, K.; Hanrieder, J. Novel Trimodal MALDI Imaging Mass Spectrometry (IMS3) at 10 μm Reveals Spatial Lipid and Peptide Correlates Implicated in Aβ Plaque Pathology in Alzheimer’s Disease. ACS Chemical Neuroscience 2017; 8: 2778-2790. ::PMID::28925253
 
Kaya, I.; Zetterberg, H.; Blennow, K.; Hanrieder, J. Shedding Light on the Molecular Pathology of Amyloid Plaques in Transgenic Alzheimer’s Disease Mice Using Multimodal MALDI Imaging Mass Spectrometry. ACS Chemical Neuroscience 2018; 9: 1802-1817. ::PMID::29648443
 
Kaya, I., Jennische, E., Dunevall, J., Lange, S., Ewing, A. G., Malmberg, P., Baykal, A. T., and Fletcher, J. S. Spatial Lipidomics Reveals Region and Long Chain Base Specific Accumulations of Monosialogangliosides in Amyloid Plaques in Familial Alzheimer’s Disease Mice (5xFAD) Brain. ACS Chemical Neuroscience 2019; 11: 14-24. ::PMID::31774647
 
Kaya, I., Jennische, E., Lange, S., Baykal, A. T., Malmberg, P., and Fletcher, J. S. Brain Region-Specific Amyloid Plaque-Associated Myelin Lipid Loss, APOE Deposition and Disruption of the Myelin Sheath in Familial Alzheimer's Disease Mice. Journal of Neurochemistry 2020. ::PMID::32141089
 
Degree
Doctor of Philosophy (Medicine)
University
University of Gothenburg. Sahlgrenska Academy
Institution
Institute of Neuroscience and Physiology. Department of Psychiatry and Neurochemistry
Disputation
Måndagen den 8 juni 2020, kl. 13.00, Hörsal KB 10:an, Chalmers Tekniska Högskola, Kemivägen 10, Göteborg. https://gu-se.zoom.us/j/69844849327
Date of defence
2020-06-08
E-mail
ibrahim.kaya@neuro.gu.se
ibrahimokaya@gmail.com
URI
http://hdl.handle.net/2077/63614
Collections
  • Doctoral Theses / Doktorsavhandlingar Institutionen för neurovetenskap och fysiologi
  • Doctoral Theses from Sahlgrenska Academy
  • Doctoral Theses from University of Gothenburg / Doktorsavhandlingar från Göteborgs universitet
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Thesis Frame (10.07Mb)
Cover (2.708Mb)
Abstract (317.2Kb)
Date
2020-05-18
Author
Kaya, Ibrahim
Keywords
Alzheimer's disease
Lipids
Amyloid plaques
Mass spectrometry imaging
MALDI
Trimodal MALDI
Static MALDI
Dual polarity MALDI-MSI on the same pixel points
Neurodegeneration
Immunopathology
Amyloid peptides
APOE
Myelin
Sulfatides
5xFAD
tgSwe
tgArcSwe
APP
Publication type
Doctoral thesis
ISBN
ISBN 978-91-7833-918-1 (PRINT)
ISBN 978-91-7833-919-8 (PDF)
Language
eng
Metadata
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